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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39984707, gi|...
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPADLHAMA REEQARQEAL RCRIMVCAGT PCLSAGALAV LDALRQAVEE SRLDAEIEAV  60
   61 STGCMGPCSR GPLVKVAVQG KPEIVYERVT PELARQILYS VVKGRRPPTA SPLPPDHPYF 120
  121 TRQMKIVLAN CGSIDPERIE EYVATGGYDA LAHALHEMTP EDVCREISAS GLRGRGGAGY 180
  181 PAGVKWNLAR KAPGERKYVV ANGDEGDPGA YMDRSVMESD PHRILEGMAI AGYAIGADQG 240
  241 YIYVRGEYYL AGRRLEAAIR DAERKGLLGS RVLGSNFSFR IDIRTGAGAF VCGEETSLMA 300
  301 SIMGRRGQPW HRPPYPAQRG LWGCPTLINN VETLATVPAI IGRGATWYAG IGSTRSPGTK 360
  361 VYALAGQVET AGLIEVPMGT TLREVVFDIG GGIPGGKRFK AAQSGGPSGG CIPAEHLDTP 420
  421 LDYESMERIG TIMGSGGLII MDETSCMPDV ASFFLDFCRD ESCGKCIPCR VGSMEMHRLL 480
  481 RRITSGTAWP DDLRRLEELC DLMGATSLCG LGQTAPNPVV STLRYFRHEY EAHIRERRCP 540
  541 AGRCTMAAEQ EPGPGGKALL HAVGVPGEVG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle