YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39997794, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMYRSFAAT LVALLMLVTV AGAEERLKMS TTTSTQDSGL LKVLLPPFEK KNNVKVDVIA  60
   61 VGTGQALKLG EAGDVDVVFV HARKLEDKFV ADGFGVNRKD VMYNDFVIVG PKNDPAGIAK 120
  121 AKTAAEALKL LATKGATFIS RGDKSGTHTK ELDLWKSAGV DPKGNWYVEA GQGMGPVITM 180
  181 ATERRAYTLT DRGTYNAFKG AKTDLVILFQ GEKGLFNPYG IMAVNPKKFP HVKYDLAMKL 240
  241 IDYVTGPEGL KIISDYKAHG EPVFFIYKK

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	269	0.99