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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39997780, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAREPAAAE QPPVVRLKGV GLRYGKTPAL ENISLDLPAG CMVGFIGPDG VGKSSLFSLI  60
   61 AGSRAVQSGA VEVLGGSMAD RGHRRTVCPR VAFMPQGLGR NLYPTLSVFE NADFFARLFG 120
  121 HGRRERERRI LELLRATGLE PFSDRPAGKL SGGMKQKLGL CCALIHDPDL LVLDEPTTGV 180
  181 DPLSRRQFWE LIDRIRAKRP GMSVLVATAY MEEAARFDWL VAMNGGRVLA TGSPAELLAQ 240
  241 TGTAALEEAF IALLPPSQRE GHRPVEVFPR ETDVSAEAAI EAHGLTMRFG EFTAVDHVSF 300
  301 RIGRGEIFGF LGSNGCGKTT TMKMLTGLLP ASEGEAWLFG RPVDSQDIDT RRRVGYMTQS 360
  361 FSLYGELTVR QNLVLHARLF RLPEKGIPAR VKEMAERFGL VEVMESLPDA LPLGQRQRLS 420
  421 LAVAMIHGPE MLILDEPTSG VDPVARDAFW HIMLDLARRD GVTIFISTHF MNEAERCDRI 480
  481 SLMHAGRVLV SDTPAALIER RGAASLEEAF IGYLEEAATD SDAMAPPLQE HALSPQPRAP 540
  541 SDLGPAREGG PEGGGFFSLR RLFSYTRREA LELRRDPIRL TLALLGSVIL MLVIGYGINL 600
  601 DVENLSFAVL DRDQTTLSRD YALNLAGSRY FNERPPIIDY GDLDRRMRAG EISLAIEIPP 660
  661 GFGRDLRRGA PVTVGAWIDG AMPTRAETVR GYVQGMHAQW LSVLAREHAT ALSGAGAATI 720
  721 ETRFRYNPDV KSLPAMVPAV IPLLLMMIPA MLTALSVVRE KELGSIVNLY VTPVTRLEFL 780
  781 LGKQGPYVAL AMLNFLLLTA LAVFVFQVPL KGSFPTLATA AFLYVTAATA LGLVISTFMR 840
  841 SQIAALFGTA LLTLLPAVQF SGMIDPVSSL EGAGAMIGRA YPTTHFLTIA RGTFSKGLDF 900
  901 HDLYSSFLSL ALAVPILTGL GGALLRKQEH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle