YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39997745, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLRLTGITK RFGSQTALAG LSLDMAEFKA LAVIGPSGGG KTTLLRVIGG LTAPDGGELE  60
   61 IDGERIGFDE ESLLAHRRRI GTVFQAYNLF PHLSALENIT LPLTRVHGIP QAEARDQALA 120
  121 LLERFQLAPH TAKRPAELSG GQQQRVAIAR AMAIRPRFLL LDEPTSALDP EMTAEVLDII 180
  181 MELRSEGRDI IMATHHMGFA RSVADRCLFV CDGVAAEEGP AAELFENPRS DKLRNFLAKV 240
  241 LKY

Type	Start	End	Confidence
Signal Peptide	1	26	0.63
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	243	0.99