YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39997743, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIAPTPRFR AGGWLIGLFF VLFLNVSLAL AAGDSLVVGM ELAYPPFEMT DTTGKPTGVS  60
   61 VDLATELGKA LGKKIVIQNM AFDGLIPALK TGKIDLIISS MTANAERGKS IDFSDPYLNT 120
  121 GLCLLVKKES PAKGIGDLDQ PGRSVAVKKG TTGHAWASKN LKKARVLVLD KEAAAVLEVV 180
  181 QGKADAFIYD QMSTYQNWQK NRATTRAILE PFQKESWAVG IRKGNDDLRK KVNAFLADFR 240
  241 KKGGFETLGD KYLKEQKEAF KKLGYPFYL

Type	Start	End	Confidence
Signal Peptide	1	31	0.95
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	269	0.99