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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39997597, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPILITALIY LIFFLSGATA LVYEVVWVRK LSLVFGGSHL AVTTVLAVVM GGLALGSWLF  60
   61 GRRVRTTRNL LRLYGALEIG IAFFALLFIA LLNLYSLMPA YSFESLTEHS HQLPRVALLT 120
  121 LRIVLAAIAL IVPTTLLGGT LPVLAAFMVR GRRAVGRGVA YLYALNTFGA VAGCFGAGFY 180
  181 LLGRFGVSNT MAGAITVNVL LGIACFALQG PAARYLEAGE DEAPAPLSAV TLPEEKARIG 240
  241 LVVWGIGVSG FCALGYEVLW TRVLGIVIGT NVYGFTLMLA AFLTGIAAGS GAYGLWARRL 300
  301 RPPEEGGCPV SKLIGGFGVV QIVIGLSALL VTILIRDLPT RVFFLQDLFL SQSTDLFRAR 360
  361 QFANFALVFS YLFIPAFFMG VAFPLAGTLD ACRRRKVGHA VGEVLTCNTI GAILGTVVSG 420
  421 FVLIQVFGIE RSLYLLATVN AGFGLLILAR LLRGTPRRLA TAGTVLAVVG VMAVAGTMPR 480
  481 IWDAKYFAIY RTNQPEVFRT PDLIAEAKRH TDVLYYAEGI QSIVSSIRIR GGYQAFLRNG 540
  541 RIEASDHNES LQNQYALGHL PMLLHRNPRK VLVIGAGSGI TLGAVSLHPS VSEMTLAEVE 600
  601 PKVLGVTRSF AAYNHGVLGD RRLRVAFSDG RNYLATTGER YDVITADPIH PWLSGAGYNY 660
  661 TREYFELAAE HLRAGGIMCQ WLPLYDLSAD DLRSVVRTFR QAYRHVLVWM TQGDAMLIGS 720
  721 NAPILLSEDE LAARIAVPAV AADLARVQMG SATDLLSYFV MGTAGADRFS RTGRINTDDN 780
  781 LYLEFSVPRS TGKSALPEVN VNALARHRES VLAYLDDSVP PADRLARENR WMRLDRAAAL 840
  841 ALEARAIFLG GRYDSPRFGL LVSELEGNYA AFAPWRFLRS EYLEEMASSP LPLDQLALAL 900
  901 LDESGRRVVV NVAAVMSRVS RELTVVDFVD SDERVIIGQA DINGRGRDGS AKRLAAEVME 960
  961 AVRLAYNEEL SGAEARGKPL PDQAEFVRRM REIIATMTGR QHGNPYPAQG RPIKESA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle