YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KDPC_GEOSL
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKELKPAILM LIIFTILCGG IYPAVVTGIA QAVFPKQAKG SLITDARGRE VGSTLIGQPF  60
   61 SGPKYFWPRP SATPEFGYNP AGSGGSNAGP ANPAYLKTVG ERIKALRDAG IKGSIPADLV 120
  121 QASASGLDPH ISPEAAKVQI PRVARARGMS AGALSRLIAA HTEDRQLGFL GEPRINVLAL 180
  181 NLALDTLMP

Type	Start	End	Confidence
Cytoplasmic	1	7	0.53
Transmembrane Helix	8	29	0.55
Non-Cytoplasmic	30	189	0.94