YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39997464, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGTNGKGST AAFLASILAE GGYRAGLFTS PHLTRFTERF RINGTEIAEE AAARVAGQVL  60
   61 ASAPEGTTFF EVVTAMALLH FVEEGVDAAI LEAGMGGGAD ATSAATGILT VIAPVALDHC 120
  121 EWLGETIPAI AREKAGLIRA GRPVVLSRQP AEARDVFIER GRILGAPLVC FGADFSAAWD 180
  181 ESSLAYDGLS RQLAGLRPGI GGRYQLANAA TALAAAEILA DNGFRLDSPA LRAGIDAARW 240
  241 PGRMELFSGA PRVLLDGAHN PDGARALAES LADYPRRRLI VVTGVMADKD AAGILAPVLP 300
  301 LAHEVVAVTP AVERGLDAGR LAELCREKGL NAVAGGTVAE GLALARQRAG EQDLILVCGS 360
  361 LFTVGEARAI LLSQQYEPFR G

Type	Start	End	Confidence
Signal Peptide	1	21	0.84
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	381	0.98