YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39997437, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPFLANILL ALAWMALTGT YTAGGFFTGA LAGFFVLWIT RRGRGTTGYL TRVRAVAGFI  60
   61 AFFFRELVLA NLRVAHDILT PRHHMTPGIV AVPLDVESDL EVTVLATVIT LTPGTLSLHL 120
  121 TDDRRTLYVH AMYIDDPAVL VRGIKEGFER RVREVFR

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.66
Transmembrane Helix	17	39	0.83
Cytoplasmic	40	49	0.70
Transmembrane Helix	50	69	0.61
Non-Cytoplasmic	70	157	0.50