YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39997435, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDTIIAILL GGGAFFAVLA AIGIVRFPDL YVRLSAATKA STLGTSLILA GVALFFDDAA  60
   61 VTGKITAIIV FIALTAPVAA HMLGRAAYFS GVPLWEKSVR DDLASSGEWC KRDDTDGAGT 120
  121 GQADSRADT

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.51
Transmembrane Helix	5	27	0.90
Cytoplasmic	28	35	0.47
Transmembrane Helix	36	56	0.88
Non-Cytoplasmic	57	64	0.41
Transmembrane Helix	65	88	0.84
Cytoplasmic	89	129	0.57