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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39997423, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDSSNSTTT NPGKLPWHTA PEREVLARLE TGPDGLTSAE AAERLRRHGP NTLLRKGGDG  60
   61 PLLLFWRQIN NPIGWLLIAA GALALALRKP TDAAVVFGAV IINAIIGFIQ EYRAGKAIEA 120
  121 LSAMIPEGTT ALREGRAVTV PADLLVPGDL VTLQSGDKVP ADLRLIRVKN LLVEEAALTG 180
  181 ESLPVAKQSD PVSPDAPLGD RVCMAYSGTL VVQGAATGVV VATGNGTELG RINALLNQTS 240
  241 QLETPLTRQL AKVSSGITIA VVVVVTVLIA FGIWIKDAPV GEALMVAVSL AVAAIPEGLP 300
  301 AVITICMAIG VRRMADRHAV VRHLPAVETL GSTSVICSDK TGTLTRNEMT VQVAWLDGHE 360
  361 YRFSGIGYGP AGEIEHDGTR LAEMPPPLEK LLIIALLCND AALRPEGDGW AITGDPTEAA 420
  421 LVVAGRKGGL DDHELRSRHG RLDVIPFESD TKFMATLNRM EGGHRILLKG APEIVLDRCV 480
  481 LSEPERRRIH EAMEIYARQG MRVIACASKE ADRAEEISPE DVAGGLTFAG LLCMIDPPRT 540
  541 EAMDAIRECH GAGITVKMIT GDHPVTAEAI GRQLGLLQEG QTPVEGRRLD GLSDAELQEV 600
  601 ALATNVFARV APEHKIRLVE ALQARGYVVA MTGDGVNDAP ALKRADIGVA MGITGTAVSK 660
  661 EAAKVVLMDD NFASIAAAVE EGRRVYDNLV RSLAFVLPTN LGLACTLSVA MFFFPTVRVE 720
  721 GVNELLMAMS PSQTLWINLV ASVTLSIPLA FEVLEPNAMR RPPRSPGEPV FSGFIVARLV 780
  781 VVALLMAAGG CGLFLWEYFR IVGPEPVTAA RHALALAEAQ TMCVTSITFT QVFYLLNCRS 840
  841 LRDSLLSQGV FSNPAIFIGI GILLLLQACF IYLPPLQAVF GTAPLDGMAW LYAMLVGAVV 900
  901 LPVISLDKWV RRHRHE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle