YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39984295, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKVETSSAP GTLADRSPLV GILTGSPNDL PTVVKVRDTL TELGIPSEIV VASAHRTPDK  60
   61 VLAYLDRAHK EGVQVLIGCA GVAAHLAGVI AGHTRLPVIG LPLGNGPLSG MDSLLSTVQM 120
  121 PPGVPVATVA IDGSRNAAML AARILALKYP EIDKALEEAA RKERERYDLT ADEALAKLTS 180
  181 CVK

Type	Start	End	Confidence
Cytoplasmic	1	72	0.71
Transmembrane Helix	73	94	0.66
Non-Cytoplasmic	95	183	0.60