YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39984294, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYVHATLLV AFSIACAAGC AKKELVVPEP AVVSAPAQLP ATETVAPPAT TIDAHESIAA  60
   61 TDIAEDRITP AGNATQASPL KIVYFDFDAW VLNGEAREIL AGNAEWLRKN PGVAVILEGH 120
  121 TDERGSDAYN LALGEQRAKS AMKYLQTLGI DAGRMTVVSY GEEKPAVEGH DESAWAGNRR 180
  181 VEFIPKR

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	187	0.99