YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39997352, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVSVYIIA YNEEQKIEPA LQSVTWADEI VVIDSFSTDR TAEIARKYTD KVIQVPFEGF  60
   61 GKLRNSAIAA TSHEWIFSLD TDERCTEEAK NEILAIIDSP DALDAYYVPR RNIFMGRWVK 120
  121 HSGWYPDYRQ PQLFRRGAQV FTDEVVHESF TTIGRVGHMK NAIWQIPFRN FEQMISKIDR 180
  181 YSTLGAAKMT AKGVRPGMGK ALFHALFAFF RMYILRLGIL DGWAGFVIAL YTFEGTFYRY 240
  241 AKQVEAARGW VMTRPEELER

Type	Start	End	Confidence
Cytoplasmic	1	200	0.81
Transmembrane Helix	201	233	0.63
Non-Cytoplasmic	234	260	0.50