YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39997235, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVISLGTTV FARGALLLVP GIAVLLSSTL VRADEPSLSL PKVIEYSLQN NGELKALREE  60
   61 KGVRDASKFR AGLLPNPTLD LEAGTGALTG SSDENNLTIG VSQEFLLAGK RDKRLTVAER 120
  121 ELEAYRWQLA DRERTLREEV KAVFYDVMLA EQRLKLTDRS IDLNRQLLEV TKDRLAAGDI 180
  181 PELEMNLAKV ELTRSEGARI EVERALLQTR SRLFAFMGLP AGEAPAIAGT LDNGFSLNKN 240
  241 LADLKQLALG LRPDLKALEA EKGRGDADIT LAEAEKVPNL TAGLFYTHDR RTDATGTGEE 300
  301 KVRDNLLGIR LSMPIPVFDK NQAGLQEARA KRSSSESRLT AATRIVERDV ETAYISALNA 360
  361 EKVLSLYKSN IIPQLEENLK LTQEAYRLGE VGILSVIQEQ KKFFEVSDGY LTALHDRQLA 420
  421 LVKLESAVAT DINGGVQ

Type	Start	End	Confidence
Signal Peptide	1	33	0.96
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	437	0.99