YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39984085, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVVITGKGG VGKTTLTSCL ATVLAGAGTH VLAVDEDPQM NLPNALGVPY EEAAGIVPLN  60
   61 RHADYIEEKT GIRPGRNGWG ALFKLNPDVD DVVSRLGLKV AENLSLLVMG TVKQAGGGCL 120
  121 CAENVLLDAT IRHLALRMNE AILLDTQAGM EHFGRSLAKG FGQCVVVADS SFNALSVALQ 180
  181 SAALARESGI GLVHLAVNRV TGDDLRLERF QRETGQSLPD IFDRVVQLPA EPLLQTLDPH 240
  241 VARIMADRHS GYAAAVTRLA SVLCSPPCPC ASPRDHARHH HHAH

Type	Start	End	Confidence
Signal Peptide	1	33	0.97
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	284	0.99