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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39997177, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGQRFIRDT QEPKRQLVVL LIAVGVFFFI LVTRLWYLQI IKAEDFQSLS ENNRLRLVPV  60
   61 AASRGTIFDR NGAVLVSNRP SFSVAVIPQE VRDRDWLVDQ LVTLLGADRD ELVKKWEKGK 120
  121 GRARYYPIVL ASGITRDQLE LLEEKRLWLP GIEVEMKPVR QYENGTLAAH LLGYIGEISD 180
  181 EELKNPAFVG YNSGDYLGKS GIERSWEEVL HGHDGGRQIE VDARGRILRT IAETPPTMGS 240
  241 SLVLTIDAQL QKRAEQAFGD QAGAAVVMEV NTGEILAFVS NPEFDPALFA GRMPPEIWKQ 300
  301 YLEDKRHPLE NKALKGQYPP GSTYKIITAL AGLEEGIIDD HTTVTCKGSY ALGNTTFRCW 360
  361 DKKGHGAVDL RRALRESCDV YFYVLGEKLG IDRLSAYAQK FALGAPMGVG LDNEKGGLIP 420
  421 TSAWKLQRHK TRWFQGDTLS AAIGQGYVLM TPIQLASMTA AIATDGIVYR PRLVKRIIDR 480
  481 DGKVLREFQP EIITRADISP RSFKSVKEGL WAVVNESGGT GGMSRIPDVR VAGKTGTSQV 540
  541 VKLRDTRGFI PYQYRDHALF VAYAPYEHPE VAVAVVIEHG EHGGSAAAPI AGSILRAYFE 600
  601 GKGVIRRPVK AGKGTAAGDD GSGENATSDE GAQPREDQE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle