YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39997154, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERLFGILSK AFMVVGGVAL LALVLLATGN VASRIGRAPF AGTYEIVSFL GAIVIAGALG  60
   61 HTQRRKDHIV VDILSERFPA PVKRLLDAVN YAVTCGLFGI AAWQVWVWGD KLRLSGELSE 120
  121 TLKLTYYPFV YVVAAGFGVL AGVLFIDCMK TVLRGKESEE

Type	Start	End	Confidence
Cytoplasmic	1	10	0.83
Transmembrane Helix	11	32	0.90
Non-Cytoplasmic	33	39	0.85
Transmembrane Helix	40	61	0.90
Cytoplasmic	62	84	0.93
Transmembrane Helix	85	107	0.89
Non-Cytoplasmic	108	126	0.92
Transmembrane Helix	127	146	0.95
Cytoplasmic	147	160	0.86