YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39997129, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRINLLPVR SSKKKETARQ QMAILLVSVL VVLGIGVGLF GYAQAKIKAT KNDISGAESE  60
   61 LQRLKGKIGE LENIKKLKDD VTKKLNVLTQ LRKEKTGPVR RLATLSDATP EKLWLTKYSE 120
  121 NGPNVSIGGV AVDEDLIAAF MRNLQQTEDY TNVELIVSEQ TEIGGVKAKR FELTCVIKAL 180
  181 KKEEPAPAKK K

Type	Start	End	Confidence
Signal Peptide	1	45	0.73
N-region	1	36
H-region	37	42
C-region	43	45
Cleavage Site	45	46
Non-Cytoplasmic	46	191	0.99