YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AROQ_GEOSL
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILVVHGPN LNMLGTREPG IYGTLTLDRI NESLVALADE LGCTISPFQS NSEGALVDAI  60
   61 QAAAGTCDGI LINPAAYTHT SVAIRDALAA VALPVVEVHL SNIHRREEFR SHSFVAAVAV 120
  121 GQITGFGADS YLLGLRALFT HIEKGIVTKG

Type	Start	End	Confidence
Cytoplasmic	1	111	0.57
Transmembrane Helix	112	133	0.61
Non-Cytoplasmic	134	150	0.85