YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39996945, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQLVDICKS NPVDEVVFCL SRQWEENIDD YLHDLEEMGI TVRMVLDHYE MRISRREMSM  60
   61 FHDEIPILTF YSKNFDATQL FLKRCLDFLG STIGLLITGA LYPFIALAIR FDSPGPIFFG 120
  121 QERVGENGRI FKCWKFRSMY VDAEERKKEL EHLNEMSGAI FKIAHDPRIT RVGKFLRKTS 180
  181 LDELPQFWNV FRGEMSLVGT RPPTPDEVAK YENWQRRRIS IRPGITGLWQ VSGRNRINEF 240
  241 DEIVKLDLKY IDQWSIWLDL KIIFKTVGVV FFGTGAQ

Type	Start	End	Confidence
Cytoplasmic	1	87	0.86
Transmembrane Helix	88	109	0.83
Non-Cytoplasmic	110	277	0.96