YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39996907, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPLTAQCSG TLLCAEHATG QHHAGVWRLR SRRIDLTSRP CIMGVLNVTP DSFSDGNCYL  60
   61 DPAAAEDRAL AMVAEGADIV DIGGESTRPG APSVSEAEEM QRVVPLVERL AAKLPVPLSV 120
  121 DTYKAAVARE ALAAGAEVIN DISGLTFDPG MATTVAEARA GLVVMHTRGT PAMMQRDTAY 180
  181 DDLIAEVLGS LRYSMGRAQA AGIPNEQIVV DPGIGFGKSV DGNLEILRRL AEFASLGRPI 240
  241 LVGTSRKSFI GAVLDREVAD RLFGTAATVA VAVANGASIL RVHDVRAMRD VALMTRAILA 300
  301 PRR

Type	Start	End	Confidence
Signal Peptide	1	20	0.90
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	303	0.97