YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39996858, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQPLAVGVL VSGNGSNLQA IIDRIEDGSL PARIVCVISN KADAFGLERA RKHGVPAIHI  60
   61 DHRAHGGRES YDAALVETLR SHGVQLVVLA GFMRIVTPVL LDAFPNAVMN IHPALLPAFP 120
  121 GLHAQAQALR YGVKFSGCTV HFVDEGTDTG PIIIQAAVPV MDDDDEASLS ARIQREEHRA 180
  181 YPEAIRLFAA KRLRIEGRKV SILQGA

Type	Start	End	Confidence
Signal Peptide	1	20	0.76
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	206	0.98