YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39983586, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRVVVTGVG AVSPLGVGNA ANWDALVSGT SGIGHITRFD ASDLPVRIAG EVKGFDPEQY  60
   61 IDKKEVKKMD LFIQYAMAAA HYAMEDSGLQ ITEENAERTG VLVGAGLGGL PTIEKYHAAM 120
  121 LEGGHKKISP FFIPMLIINL APGHISIKYG AKGPNLSSVS ACATGTHSIG DAYHMIKRGD 180
  181 ADAMIAGGTE STVTPLGIGG FAVMKALSTR NDDPTAASRP FEKNRDGFVL AEGAGIVVLE 240
  241 EYEAAKKRGA KIYAEIVGYG LTGDAYHLTA PAPEGEGAAR CMKMALNNAG VRPEEVDYIN 300
  301 AHGTSTPFND YYETLAVKSV FGDYAKKVMV SSTKSMTGHL LGAAGGVEAV FTLMAMDKGV 360
  361 IPPTINYQEQ DPECDLDYVP NAAREKSITY ALSNNFGFGG TNATLLFKKV

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	410	0.99