YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39983382, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIIKQRSR KTGLPPGSLV HIGEQTGEPV RISLVDYDET SISERETDDI AECFPHSDQP  60
   61 GVRWLDMEGI HRPELLKTLG ECYGIHPLTL EDILNTDQRP KLEDFDDYLF VVLKMLSLQP 120
  121 DGSLTAEQVS FVLGPSFLIS FQEGFKGDLF DSIRRRLREN RGKLRKSGSD FLLYSLMDAI 180
  181 VDYYFVILED LAERIEELEE EVIAGPSRKT VVKIQHLKRE TIFLRKSVWP LREVLGRLER 240
  241 RESPLVRGET VIYLRDVYDH CIQIIETVET FRDLLSEILD IYLSAIGNRT NEVMKVLTII 300
  301 ATIFMPLTFI AGVYGMNFRY MPELEWHWGY PAVLLLMLLV SLGMGIFFRR KRWL

Type	Start	End	Confidence
Cytoplasmic	1	295	0.97
Transmembrane Helix	296	316	0.93
Non-Cytoplasmic	317	326	0.87
Transmembrane Helix	327	348	0.94
Cytoplasmic	349	354	0.92