YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39983360, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTLLAGLPD GCGAAALALR RGDVILQAGV NLSSDHSTGP GSPAPLFLAY SCTKTFIAAL  60
   61 VLRLGEEGRL ALTDPVSRWF PDLPHSSAIT VRHLLNHTSG LPDYGPLAAY HQAVRRTPSR 120
  121 PWNSDEFLAR TLAQGVLFEP GKGWSYSNIG YLLLRMIVET LTGERLAGLL AARFFHPLGL 180
  181 GDTFVPETVA DLGRLQPSRS GLVAEEGAVD VRRVYHPGWV SHGVVASTPA DMAEFCRRLF 240
  241 TGAVLSRDSL AAMTTLTPVP GAPPRYGRPC YGLGIMADCA SRFGMLLGHN GGGPGYGASV 300
  301 FHAPDHHGGP LTVCAMVACE APDLAERLVM AVLEETA

Type	Start	End	Confidence
Signal Peptide	1	18	0.59
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	337	0.98