YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39996452, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTDQQIERY SRHIILKEVG GKGQKKLLDG KVMVIGAGGL GAPIALYLAA AGVGTIGIAD  60
   61 ADVVDLSNLQ RQVIHFTPDV GKPKVESARE KMEAINPDVR VRTYQEWISA ANIARIIADY 120
  121 DFVIDGTDNF AAKFLVNDAC VLAGTPYSHG GILQFDGQTL TVKPGESPCY RCIFPAPPPK 180
  181 DAIPTCARAG VIGVLPGVLG TIQATEAIKY LLGQGDLLTG RLLTYNALRM RFREVPVKKS 240
  241 ARCPVCGDNP TITELVDELD IETS

Type	Start	End	Confidence
Cytoplasmic	1	31	0.65
Transmembrane Helix	32	58	0.58
Non-Cytoplasmic	59	264	0.92