YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39996424, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESTNITFVG AFVAGLLSFL SPCVLPLIPS FITYITGLSF ADIQSEHPTH KVRQQTIVHS  60
   61 LLFIAGFTFV FVLLGASATF IGGFLHEHMN VIRKVGGALI VIFGIHVSGL VPIHLLLGEK 120
  121 RLQVHRKPAG YLGSFLVGLA FAAGWTPCIG PILASILMVA ATEETVTKGI LLLFTYSMGL 180
  181 AIPFFLSSLA MHQFLTFFNR FKKHIRILEI VTGLFLVVVG VMIFTNYLSV LSRYTMKWFG 240
  241 GM

Type	Start	End	Confidence
Non-Cytoplasmic	1	11	0.75
Transmembrane Helix	12	38	0.80
Cytoplasmic	39	56	0.85
Transmembrane Helix	57	81	0.87
Non-Cytoplasmic	82	94	0.78
Transmembrane Helix	95	117	0.91
Cytoplasmic	118	130	0.81
Transmembrane Helix	131	157	0.83
Non-Cytoplasmic	158	169	0.75
Transmembrane Helix	170	195	0.80
Cytoplasmic	196	206	0.80
Transmembrane Helix	207	230	0.87
Non-Cytoplasmic	231	242	0.85