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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39996378, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKKI LIIGAGPIVI GQACEFDYSG TQACKALKEE GFEVVLLNSN PATIMTDPDF  60
   61 ADRTYVEPVT PEVLAKIIEK ERPDAVLPTL GGQTALNTAV AVAENGTLEK FGVELIGAKL 120
  121 PAIKKAEDRT LFKEAMEKIG LSVPRSGLAH NYSEAMTVVK TVGFPAIIRP SFTLGGTGGG 180
  181 IAYNMEEYEK MAMAGIDASP TDEILVEESV IGWKEYELEV MRDTADNVVI ICSIENFDPM 240
  241 GVHTGDSITV APAQTLTDKE YQILRDAALK IIREIGVDTG GSNIQFGINP RNGRLVVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDEIRNDIT RETPACFEPT IDYVVTKIPR 360
  361 FTFEKFPAAD ATLTTQMKSV GEVMAIGRTF KESFQKALRS LEIGSAGFES RIFTNGDTRR 420
  421 ALAPNEQQQL QDKLRVPNWE RLWYLGDAFR CGMSIEEVFQ LTAIDPWFLH NIKQIIEKEE 480
  481 ELRKVDVTAA APDDLRAIVR EAKQYGFSDR MLGRFWGKSD EEIRQLRLSL GIKPVFKRVD 540
  541 TCAAEFVAYT PYLYSTYEDE CEAEVTDRKK IMILGGGPNR IGQGIEFDYC CVHGVFALAE 600
  601 DGYETIMVNC NPETVSTDYD TSDRLYFEPL TYEDVLSIVE LEKPEGVIVQ FGGQTPLKLA 660
  661 VALEKAGVPI IGTSPDAIDR AEDRERFQEM LHKLNLLQPE NGTARSFEEA EEVANRIGYP 720
  721 VVVRPSYVLG GRAMEIVYDV ENLRRYMTTA VQASPEHPIL IDKFLDKAIE IDVDALCDGT 780
  781 DVVIGGIMEH IEEAGIHSGD SACCLPPHSI SQALVEEIRR QTTVMALELN VKGLMNVQYA 840
  841 IKDGTIYILE VNPRASRTAP FVSKATGRPL AKIAARVMAG RSLKDLGVSG DIVPKHMSVK 900
  901 EAVFPFVKFP GVDTLLGPEM KSTGEVMGIG PDFATAFAKA QLGANVRLPR SGKVFISLHD 960
  961 ADKKHIVESA KKLYNAGFRL VATRGTAAYL KEKGVEVEVI NKVLEGRPHV VDAIKNGEIC1020
 1021 MVLNTTQGAQ AVADSFSIRR EALMHNVAYF TTVAGANAAA GGIVAMLEGE LDVKPLQEYL1080
 1081 G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle