YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39996201, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLTLGGKI GRITPALAAA VMGLTITASP VLAADKLVKI DGSSTVYPIT EAVAEEFQKA  60
   61 KRGAVKVTVG ISGTGGGFKK FCRGEIDLSG ASRPILKKEM EACKQAGIQY IELPVAYDAL 120
  121 TVVVNPQNTW VKSMTVDELK KIWEPAAQGK ITKWNQVNPA WPNQPLKLFG PGADSGTFDY 180
  181 FTEAVVGKAK SSRGDFTASE DDNVLVQGVS RDRGGLGYFG YAYYAENSKK LKAVPIVEKA 240
  241 GKPAVSPSID TVKNGSYQPL SRPIFIYVNA KSVDKPEVKE FVDFYLNQAP KLSKAVKYVP 300
  301 LPDKAYALAK SNFAKKKTGT GFGGEPEVGV SVEELLQREG KH

Type	Start	End	Confidence
Signal Peptide	1	33	0.99
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	342	0.99