YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39982881, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKRLVILAV LSLSSLMLSG CLVGEGKYLK KVEEADNLSK ELTTLQEKYS ALSSENEGLK  60
   61 GALAKLKDEA AGLAQDKEKL TADNRELQQV LQAKSDSLSQ NIVELRQKVS QLEAENARLK 120
  121 ADIASTQKAK EEQVREVSKT YEDLLDKMKG EIAQGQVTIS ELKGKLTVNM VDAILFDSGK 180
  181 AEVKPAGMDL LQKVVEILKD VKDKAIRIEG HTDNVQIVGN LAKRFPTNWE LSSARAINVT 240
  241 RFLQSRGIDP AVLSAVAYGE YHPVAPNDTD EGKAKNRRIE IILVPKDAP

Type	Start	End	Confidence
Signal Peptide	1	24	0.95
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	289	0.99