YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39982754, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTASPINTA KSRAGSTFRR LSSLLPGLFF FLGLLALTLP FTAHAETDSD RELLELYYEP  60
   61 QDLTVSTATR SPRPLSRSAE NITVITAEQI EAMNAHTLAD VLATVPGVQV SGNTAPASIT 120
  121 FTEFAGATTR YIQILVDGVP IDDQFDNFAA PGMVPVQIIE RVEVLKGPAS SSWGNSLGGI 180
  181 VNVITKEPAL HASFSGAASF SGGENGTRDG RGEVSGTVGS FGYYLSGGNV KSNGFHSFNA 240
  241 TENNNAYAKL RWNLADRGSL RLTFNSMETA PQIGLITFAD YSDRLKIRFL QSTISLDYNL 300
  301 TDRLTFNTFF KGSRFDYTRI DDTLSTGERF STITSDEITS GGAAILTWRQ GVHTLTGGVE 360
  361 FDHGQTKTSF DYPLFLFNQT IDASNDKWGF FLNDTITWER FSITPAVRYD LTSHSGDFFS 420
  421 PSLGATFSVT DKTLLRAYAA RGYNLPILNP AYSTKDNGWT VQAGLETTDI PFLWLKGTWF 480
  481 RNQFKERGDT VTRTLREGFE IEARTAPIYN SWLTAGYVFT DAKNLQTDEK LPAVARHTWD 540
  541 LGLHYDDRTF RGALTGAYRW WNTPDYFGAE YNNFIWDLNL GWRFFRSDNT EAELFATGHN 600
  601 LFNGAQYHDE IFKNPGRWFE GGLRIKW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle