YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39982578, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKWLYLLVA IISEVAGTTA LKSAEGFTRL WPSCVVVAGY ASAFYFLSLT LKAIPVGIAY  60
   61 AIWSGLGTAL VAVVAWVFMG QRLDLPAVFG ILLIIAGVLV LNLCSTSATH

Type	Start	End	Confidence
Cytoplasmic	1	4	0.72
Transmembrane Helix	5	21	0.46
Non-Cytoplasmic	22	28	0.37
Transmembrane Helix	29	49	0.89
Cytoplasmic	50	55	0.44
Transmembrane Helix	56	79	0.89
Non-Cytoplasmic	80	84	0.46
Transmembrane Helix	85	106	0.90
Cytoplasmic	107	110	0.43