YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39982577, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTWGILVLAG LFEVGWAIGL KFTEGFTRLW PTVLTVLAMI ASFWLLEIAM RTLPVGTAYS  60
   61 VWVGVGAVGT VLLGIVLFGE PANPARLISV ALIVAGIIGL KLSSPA

Type	Start	End	Confidence
Cytoplasmic	1	4	0.51
Transmembrane Helix	5	20	0.55
Non-Cytoplasmic	21	27	0.46
Transmembrane Helix	28	48	0.90
Cytoplasmic	49	57	0.50
Transmembrane Helix	58	78	0.95
Non-Cytoplasmic	79	84	0.52
Transmembrane Helix	85	104	0.88
Cytoplasmic	105	106	0.59