YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39995718, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENPQVLIIM GSDSDVPVME EAAKALDAFG VTWEMRVASA HRSPKKAADL ASNAAARGVK  60
   61 AIIAGAGVAA HLAGVLAAET ILPVIAVPMP GGALNGVDAL YSMVQMPGGI PVATMAIGKA 120
  121 GAKNAGLFAV QILALGDAAM AGRLVEYKAS MAEEVEAKDR ALQVKLGRA

Type	Start	End	Confidence
Cytoplasmic	1	60	0.93
Transmembrane Helix	61	86	0.77
Non-Cytoplasmic	87	98	0.80
Transmembrane Helix	99	118	0.61
Cytoplasmic	119	169	0.65