YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39982376, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAVKRHLTA LLRVALGVVF LYAAVIKIAN PPAFAGNVAA YQLLPYAGNY LVAAILPWIE  60
   61 AICGLLLVTG WRARSAAALV AVMNILFIVL LISTVARGLD IDCGCFRQGG EKTSAWTAIF 120
  121 RDIMLLVAAV FVFRKTKQ

Type	Start	End	Confidence
Cytoplasmic	1	8	0.97
Transmembrane Helix	9	29	0.91
Non-Cytoplasmic	30	46	0.88
Transmembrane Helix	47	69	0.89
Cytoplasmic	70	76	0.80
Transmembrane Helix	77	98	0.90
Non-Cytoplasmic	99	114	0.90
Transmembrane Helix	115	133	0.92
Cytoplasmic	134	138	0.78