YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39995596, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQATHHRLLI LGSGPAGYTA AVYAARANLS PALITGLQQG GQLMTTTEVD NWPGDPDGVL  60
   61 GPDLMDRMRR HAERFNTAMI YDHIHTANLR ERPFRLEGDS GIYTCDALII ATGASARYLG 120
  121 LPSEEAFKGK GVSACATCDG FFYRGKPVAV IGGGNTAVEE ALYLSNIASH VTLVHRRDKL 180
  181 RAEKILADKL IEKTRGGNVT IEWNHVLDEV LGDQAGVTGV RIRHTSGSTK ELDVHGCFIA 240
  241 IGHTPNTHLF EGQLEMDEGY IRTQCGAEGN FTATSIPGVF AAGDVQDQHY RQAITSAGTG 300
  301 CMAALDAERY LDMLKP

Type	Start	End	Confidence
Signal Peptide	1	24	0.93
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	316	0.99