YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39995528, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAADEKAPVE GAPKDKKKLF IIIGAAAVVI IALAVVFLGG GKKEKGKEGE AEAKVEQKAE  60
   61 GGHGGGKEGA AGAVATAFAL EPFIVNIYDG QELRYLRVKV EFETATPDAK AEIESRQAPL 120
  121 RDAILVLLTT KTLQDIQDLQ GKNQLRDEIL VAANKILPPG KVTKVYFTDF VVQ

Type	Start	End	Confidence
Cytoplasmic	1	18	0.77
Transmembrane Helix	19	40	0.93
Non-Cytoplasmic	41	173	0.54