YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39982281, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEALNKLIQ PFMALPPAKR WVVGGVVGLS VIAFTILILV ANRTDYRPLF TNLTSEDAGE  60
   61 IVTKLKEQKV PYRIAADGKA ILVPSDKVYD LRLSLASDGL PQGGGVGFEI FDRKNFGMTD 120
  121 FVQKLNYQRA LQGELSRTIS QISGVEQARV HLVIPEKSLF KEDEKPATAS VVLKVKGQRQ 180
  181 LRENDVQGIV HLVASAIEGM NPEHVTVLDQ KGKLLSKNTP GDAAGKMTAS MQEVQRAYER 240
  241 STEERLQSLL DKAVGAGKSV ARVSAVFDFR QVERYEEKYD PETVVRSEQR SEEKQDGSTV 300
  301 TGGVPGVQTN LGRTAGQPAG TSGGGSKNDE TLNYEVSRAT ARTIEPVGTL SKVSVAILVD 360
  361 GKYDAAAAGK DGKEAKPKYT PRSPDELQKI DALVKSSVGF NVERGDQVTV VNIPFQDTGD 420
  421 VGAGEADKWW NAPIFLSLLK NGLIGFGFLA LLLFVVRPLL KTLKPEKSTS FEPIPSAEDA 480
  481 LNQIAEIHRL QIGNQTVSQM ELINKIKQEP YQAAQIIQNW LRDKGEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle