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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39995508, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIKRYRNWG ILPKIMTISG ITVVLIAALV LFVLLPLIGE KMMDGKKEKT KSVVEVAYNL  60
   61 VADLGERAKR GEISEEEARK RAIDHVKQLR YQGKEYFWIN DLTPRMIMHP IKPELDGTDL 120
  121 SENKDPRGTY LFREFANICR EKGEGFVPYL WPKPGASEPV EKISYVKLYE PWGWVIGSGI 180
  181 YVDDVRADMA RLRWVVLGGT ALFGLFALSL AFSVGLGVVR PLRHAVTSLQ DIAEGEGDLT 240
  241 RRIAVEREDE SGELALAFNR FVEKLQGIVG TVANNALQVA AAAGQVQEAS RQMAEAAENV 300
  301 AGQAATVATA SEEMAATSME IAGNCVSLAD GARHASETAE SGAAVVQETV SVMGRIAERV 360
  361 KEAARTVDSL GSRSDQIGEI IGTIEDIADQ TNLLALNAAI EAARAGESGR GFAVVADEVR 420
  421 ALAERTTRAT REIALMIKAI QNETRGAVAS MDEGVREVEK GTGEAARSGA ALREILEQIG 480
  481 SVSLQISQIA TAAEQQTSTT TEISGSIQTI TDTAHETARG AQESAGAAGQ LADLAEQLQN 540
  541 VVMTFRLSA

YRC Informatics Platform - Version 3.0
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