YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NUOK1_GEOSL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLHSYLIV SAILFSIGTI GVLVRRNAIV IFMCVEMMLN AVNLTFIALS RHLGNIDGQI  60
   61 FVFFVMTVAA AEAAVGLALM IAFYKNRESI DVEDVKLMKL

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.79
Transmembrane Helix	5	24	0.88
Cytoplasmic	25	28	0.74
Transmembrane Helix	29	50	0.84
Non-Cytoplasmic	51	59	0.72
Transmembrane Helix	60	83	0.92
Cytoplasmic	84	100	0.89