YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NUOA1_GEOSL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGVYLPIIV LVAVAVIFGL ASLTFSSLIG QKKPSAVKLA PYECGCEPVG SARERFSVKF  60
   61 YIIAMLFILF DIEAVFMYPW SVLFKRLGIF GVVEMGLFIV ILFVGYIYVW KKGALEWE

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.80
Transmembrane Helix	8	29	0.94
Cytoplasmic	30	59	0.93
Transmembrane Helix	60	80	0.92
Non-Cytoplasmic	81	86	0.83
Transmembrane Helix	87	110	0.91
Cytoplasmic	111	118	0.96