YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATP6_GEOSL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHPLLFLQF FRKLLEPLHI SEAGADAIAY TWLIIVCLLI VSLIATKALK AVPTGMQNFM  60
   61 EVVIGGIENM VEETMGEKGK PYFPLIATLA LFVLVSNLIG LIPGFFPPTA NLNTTAACAV 120
  121 IVFLSTHIVG IKKHGFHYLQ HFMGPIWWLA PLMFFIEIIG HLSRPLSLSL RLFGNMNGHE 180
  181 LVLMIFFALA PFLVPLPMML MGVLVSFIQA FVFMLLAMIY IQGSLEEAH

Type	Start	End	Confidence
Cytoplasmic	1	27	0.52
Transmembrane Helix	28	49	0.90
Non-Cytoplasmic	50	81	0.51
Transmembrane Helix	82	105	0.87
Cytoplasmic	106	111	0.41
Transmembrane Helix	112	131	0.86
Non-Cytoplasmic	132	140	0.52
Transmembrane Helix	141	163	0.83
Cytoplasmic	164	175	0.47
Transmembrane Helix	176	196	0.79
Non-Cytoplasmic	197	199	0.39
Transmembrane Helix	200	223	0.82
Cytoplasmic	224	229	0.64