YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39982202, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVYLLTAL LIALNSLAAA RIAAGLISYR LARTAPHTAM GATGAPAAAV SDDILSFASI  60
   61 LDQGLFGRAT QGKLTPLSAP VQGAAGAQQP APTHGDLTLL GTARGSFRET FALIRRATPP 120
  121 EERVFRLGDT VFGIGPLVGV QKESVEILAN GRKIRLTTPL AMGIEPTSAP PPPAVAPQTG 180
  181 AVQVGAGSYV IDQRALNAAL ENLGQVMTDA RLLPSVKEGK VEGFRISEVK PAGVFSMIGM 240
  241 RNGDILLRIN DLPVDSPERA IQSLASLKGQ NRIKLDLVRD GQPTTFSYDI R

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	291	0.99