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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39982201, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRFLNLLT AAVLACALLA PLPASAKGVV LNFNDVDIAT MVKFISDLTG KNFVLDERVK  60
   61 GKISIYSPSK LTPDEAFSLF TSVLELKGFT LVQAGKVYKV VPTAAAKQSG MRLLSDKDRL 120
  121 PVSDAYVARI IPLERISAQE AVAFLQPIVS KDGYIAAFGA SNMLMVVDSA LNIQKLTGIL 180
  181 TLVDSPQKRE GAEIIFLKNA SADSVSGVIR EWLGGKTSRP AGQAGQATAT SSAGVLIVPD 240
  241 TRLNALVIFG SDQDKDDIKK LIAMVDVVPP TTSSKINVYY LENADATDVA KVIDGLIKGT 300
  301 PTTPGQPGVP AAAPVQSPFE GGKISVTPDK ATNSLVIMAS PVDYQNILQV IQKLDKRRRQ 360
  361 VFVQALIAEV SLDKLKDVGV QIGALAVGTQ GDASGGAVLD PFNFLSATSG PQFLLVKALE 420
  421 ELGKNVSVSA QVKALVSDGA INVLSTPNIL TSDNKEAEIF VGENVPFLSQ TNLTTGGISQ 480
  481 QSIERKDTGI TLRITPQISE GEYVKLDIYQ EISAVKENKG QANDLVTTKR SAKTAVVVKD 540
  541 KDTVVIGGLI QDRDTETINK IPLLGDIPLL GWLFKTKSTR REKTNLMIVL TPRIIRGAEE 600
  601 MNDVSGQQRD KFGEALSLDA PFDLKRDLQL SK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle