YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39982197, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTSRAGTCN NHGFTLMELV VVIAILALAA ALVLPRLTPG DTANLHRAAR EFAATLRFIQ  60
   61 DRAITAKTAY RMKLVPGESA IAITTILPDG TEGEPDDPIL RRRLLPEGIS IASTFTPRVG 120
  121 KRAAGEVVVT VGAAGFEEFT VFHLKAEGSD AVMTVMAYPS SGKVKVAEGY REEPL

Type	Start	End	Confidence
Cytoplasmic	1	12	0.41
Transmembrane Helix	13	34	0.61
Non-Cytoplasmic	35	175	0.75