YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39982194, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSESERGF ALILTLVVTA LLIAVTTEFI HGVYVDTSLH RNFVNLQQAS LMAEGGVTGG  60
   61 ISLLRNLRTS GNDQGLQQLL ADPVQFEDEK GRVSITIEEE DGKLNLNAVT LPNGDEHVFY 120
  121 GPAERRLLTA LKLPTALHDS LADWLDANDE PRPDGGESAY YQSLSAPYAP RNAPFATFGE 180
  181 LGLVRGVEPA VLERLRPFAT VFVDGGAINV NTAPLQVLMA LDEGISEGIA RDIMQRRRIK 240
  241 PFKSVGELSE IPGMETIAGK LSGFAGARGS TYRLVSRAAV GDVTRLVEAV VNLDGTQPRY 300
  301 LYWREY

Type	Start	End	Confidence
Signal Peptide	1	27	0.64
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	306	0.91