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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39982101, gi|...
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDTLIPRTP SAYDYPLLIK SLLRNPVVDN PDQEIVYRGV IRHTYRDLRE RVRRLANVLT  60
   61 GLGVKAGDTV AVMDWDSHRY LELFFAVPMI GAVLHTINVR LSPEQILYTI DHAEDDLLLV 120
  121 NSEFLPILEQ IRGRIDTVRG YVLLTDEEKM PESHIPFVGE YEALLAAASG EYDFPDFDEN 180
  181 TRATTFYTTG TTGLPKGVYF SHRQLVLHTM GVMASLGTVF AHGRLHQGDV YMPITPMFHV 240
  241 HAWGVPYLAT MLGIKQVYPG RYSPDLLLDL IEKERVTFTH CVPTILHMLL KHPHAKRVDL 300
  301 AGLKMIIGGA AMSRALCCEA LERGIDVFTG YGMSETCPIL TFSRLTPEML AGSPAEQAEV 360
  361 RCLTGLSLPF VDLRVVDPET GAEQPRDGRS AGEIVVRAPW LTQGYLKDHR TSEKLWEGGF 420
  421 LHTGDVAVRD ERGYVRITDR TKDVIKVAGE WVSSLELEDI LAHHPAVAEV AVIGQPDEKW 480
  481 GERPLALVVL KPEEAGRVGE KDLAHFVREY ADKGMVSKQV VLLKVRLVDA IDKTSVGKIS 540
  541 KVTLREKYLA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle