YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39982099, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAVELFCGI GGFAAAVEGT GVRVVAAMDQ DEAALATYRL NFPGHGARKV DLERVSAWEL  60
   61 TAGGVDLWWL SPPCQPYCER GVRRDLADPR ARSLVHILNL AARMSDEALP RHLALENVAG 120
  121 FVGSEAHGRL TEVLSSRGYR LQERLLCPTE LGIPSRRPRY YLAASRESLA PAEVLSPLPR 180
  181 QPLAEYLDLL PANGQPAELL LSPAIVERFG AGFRILDPAD PDAYTTCFTS GYGRSLTASG 240
  241 AYLRCSDGVR RFSPEEIARL LHFPPSFRFP EEVPLRKRWQ LVGNSLSVAA VREVLRALPL 300
  301 PAEEG

Type	Start	End	Confidence
Signal Peptide	1	19	0.83
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	305	0.99