YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DAPA_GEOSL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKGSIVAIV TPFTNGAVDQ EKLRELVEFQ ITNGTDAIVP CGTTGESSTL DYDEHMDVVK  60
   61 IVIEQVNKRV PVIAGTGSNS TAEAIELSRK AKEAGADGVL LVTPYYNKPT QEGLVRHYTA 120
  121 IADAVAIPQI LYNVPGRTGV NMLPETVARL APHKNIVAIK EATGSLQQAS EILALCGDQI 180
  181 DVLSGDDFIT FPMMACGAKG VISVLANIMP KAVADLTDAF FAGDLETARR LHLNTLKISN 240
  241 AMFIESNPIP VKTALGLMGK CSDEVRLPLC PMSEGNKAKL TAIMKEYQLI

Type	Start	End	Confidence
Signal Peptide	1	16	0.71
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	290	0.99